Extracts coefficients from an existing mvSuSiE fit or fits `mvsusieR::mvsusie()` from `X` and `Y`.
Usage
mvsusie_weights(
mvsusie_fit = NULL,
X = NULL,
Y = NULL,
prior_variance = NULL,
residual_variance = NULL,
L = 30,
L_greedy = 5,
verbose = FALSE,
...
)Arguments
- mvsusie_fit
Optional fitted mvSuSiE object.
- X
Genotype matrix. Required when `mvsusie_fit` is NULL.
- Y
Phenotype matrix. Required when `mvsusie_fit` is NULL.
- prior_variance
Optional mvSuSiE prior variance list.
- residual_variance
Optional residual variance matrix.
- L
Maximum number of components.
- L_greedy
Initial greedy number of components.
- verbose
If TRUE, prints mvSuSiE fitting progress.
- ...
Additional arguments passed to `mvsusieR::mvsusie()` when fitting.