Deprecated. Use [ld_loader()] with its LD_info
argument instead. This wrapper remains for backwards compatibility and
produces the same list(LD_info, region_info) output as the original.
Usage
get_ctwas_meta_data(ld_meta_data_file, subset_region_ids = NULL)
Arguments
- ld_meta_data_file
Path to the LD meta-data TSV file.
- subset_region_ids
Optional character vector of region IDs
("chrom_start_end") to subset to.
Value
A list with components:
- LD_info
Data.frame with columns region_id, LD_file,
SNP_file.
- region_info
Data.frame with columns chrom, start,
stop, region_id.