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The sub-intervals of the functional grid where a credible set's band excludes zero (the genomic footprint of each fSuSiE effect), from the upstream fsusieR::affected_reg. Returns a GRanges with the credible-set label, its purity, and the effect direction ("pos"/"neg"; upstream discards it). Requires an UNtrimmed fit; empty otherwise.

Usage

fsusieAffectedRegions(x, ...)

# S4 method for class 'FineMappingEntry'
fsusieAffectedRegions(x, ...)

# S4 method for class 'FineMappingResultBase'
fsusieAffectedRegions(x, ...)

Arguments

x

A FineMappingEntry or FineMappingResultBase.

...

Ignored.

Value

A GRanges of affected intervals with mcols cs, purity, direction (plus entry identity for the collection).