Example cTWAS Parameter-Estimation State

The augmented cTWAS state returned by estCtwasParam (the assembled inputs plus estimated group priors and per-region data), ready for screenCtwasRegions. Derived from the de-identified protocol_example toy data; all identifiers are synthetic.

Format

A list carrying the ctwasInputsExample components plus the estimated group_prior / group_prior_var and per-region data.

Examples

data(ctwasEstExample)
names(ctwasEstExample)
#>  [1] "z_snp"              "z_gene"             "weights"           
#>  [4] "region_info"        "snp_map"            "LD_map"            
#>  [7] "LD_loader_fun"      "snpinfo_loader_fun" "resolvedMethod"    
#> [10] "region_data"        "boundary_genes"     "param"