Construct a RegionalData from genotype matrix,
phenotype and covariate lists.
Usage
RegionalData(
genotype_matrix,
phenotypes,
covariates,
scale_residuals = FALSE,
maf = list(),
region = NULL,
dropped_samples = list(),
Y_coordinates = NULL
)
Arguments
- genotype_matrix
Numeric matrix (samples x variants).
- phenotypes
Named list of phenotype matrices.
- covariates
Named list of covariate matrices.
- scale_residuals
Logical.
- maf
Named list of MAF vectors.
- region
GRanges or NULL.
- dropped_samples
List.
- Y_coordinates
data.frame or NULL.
Value
A RegionalData object.