Fine-Mapping Result

S4 container for fine-mapping output. Stores variant names, the trimmed model fit, and a long-format table of credible sets and PIPs.

Slots

variant_names

Character vector of variant IDs.

trimmed_fit

List containing the method-specific trimmed fit.

top_loci

A data.frame in long format with columns: variant_id, method, coverage, cs, pip, and optionally betahat, sd, cs_log10bf, z.

method

Character string identifying the fine-mapping method.

sumstats

List of summary statistics used in the analysis, or NULL.