Extracts coefficients from an existing SuSiE fit or fits `susieR::susie()`
from `X` and `y` before extracting weights.
Usage
susieWeights(X = NULL, y = NULL, susieFit = NULL, retainFit = FALSE, ...)
Arguments
- X
Genotype matrix. Required when `susieFit` is NULL.
- y
Phenotype vector. Required when `susieFit` is NULL.
- susieFit
Optional fitted SuSiE object.
- retainFit
If TRUE, stores the fitted object as an attribute on the returned weights.
- ...
Additional arguments passed to `susieR::susie()` when fitting.
Value
Numeric vector of variant weights.