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A pre-QC'd QtlSumStats collection covering the same (study, context, trait) tuple as qtl_dataset_example; the per-variant Z / BETA / SE / N values were computed from the synthetic phenotype by per-variant linear regression. The ldSketch slot references the same toy PLINK1 panel.

Format

A QtlSumStats S4 collection with one row (study1, brain, ENSG_example) backed by a GRanges of 200 chr22 variants.

Examples

data(qtl_sumstats_example)
qtl_sumstats_example
#> QtlSumStats: 1 entries, genome build hg19
#>   1 studies, 1 contexts, 1 traits
#>   LD sketch: plink1 @ pecotmr://extdata/toy_canonical