Example GWAS Fine-Mapping Result with LBF (SuSiE)
Source:R/exampleData.R
gwasFineMappingLbfExample.RdA GwasFineMappingResult whose SuSiE fit carries
the single-effect log-Bayes-factor matrix (lbf_variable), covering the
same synthetic region as qtlFineMappingLbfExample. The pair is
the intended input to colocPipeline (LBF-based
colocalization). Derived from the de-identified protocol_example toy
data; all identifiers are synthetic.
Format
A GwasFineMappingResult with one row (study gwas1,
method susie) whose susieFit carries lbf_variable,
alpha, and pip.
Examples
data(gwasFineMappingLbfExample)
gwasFineMappingLbfExample
#> GwasFineMappingResult: 1 entries
#> 1 studies, 1 methods
#> LD sketch: NULL