Return the genomic anchor of each row of a per-tuple collection
as a GRanges with one range per row – the trait's own region for a
TwasWeights, or the fine-mapping window for a
FineMappingResult. This is location provenance (e.g. for cTWAS
LD-block placement).
Usage
getRegion(x, ...)
# S4 method for class 'FineMappingResultBase'
getRegion(x, ...)
# S4 method for class 'TwasWeights'
getRegion(x, ...)Value
A GRanges with one range per row of x, or an empty
GRanges when the collection carries no region provenance.
Examples
data(qtlFineMappingExample)
getRegion(qtlFineMappingExample)
#> GRanges object with 1 range and 0 metadata columns:
#> seqnames ranges strand
#> <Rle> <IRanges> <Rle>
#> [1] chr22 32119788-33114493 *
#> -------
#> seqinfo: 1 sequence from an unspecified genome; no seqlengths