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Get PIP Values

Source: R/AllGenerics.R, R/FineMappingEntry.R, R/GwasFineMappingResult.R, and 1 more
getPip.Rd

Extract posterior inclusion probabilities from a single FineMappingEntry or from one entry of a FineMappingResult (selected by its identity tuple).

Usage

getPip(x, ...)

# S4 method for class 'FineMappingEntry'
getPip(x, ...)

# S4 method for class 'GwasFineMappingResult'
getPip(
  x,
  study = NULL,
  context = NULL,
  trait = NULL,
  method = NULL,
  region = NULL,
  returnList = FALSE,
  ...
)

# S4 method for class 'QtlFineMappingResult'
getPip(
  x,
  study = NULL,
  context = NULL,
  trait = NULL,
  method = NULL,
  returnList = FALSE,
  ...
)

Arguments

x

A FineMappingEntry or FineMappingResult.

...

Class-specific selection arguments.

Value

A named numeric vector of PIPs.