Get Per-Block Eigendecompositions

Return the per-block eigendecomposition list carried by an LdEigen object.

Usage

getEigenList(x)

# S4 method for class 'LdEigen'
getEigenList(x)

Arguments

x

An LdEigen.

Value

List of per-block eigen decompositions.

Examples

data(ldEigenExample)
getEigenList(ldEigenExample)
#> [[1]]
#> [[1]]$values
#>  [1] 3.7 0.7 0.7 0.7 0.7 0.7 0.7 0.7 0.7 0.7
#> 
#> [[1]]$vectors
#>            [,1]         [,2]         [,3]        [,4]         [,5]        [,6]
#>  [1,] 0.3162278 -0.182582950  0.000000000 -0.24891760  0.000000000  0.00000000
#>  [2,] 0.3162278  0.779056986 -0.047643407  0.47166438 -0.048999964  0.05092325
#>  [3,] 0.3162278 -0.570977695 -0.026823087  0.69554676 -0.027586824  0.02866963
#>  [4,] 0.3162278  0.118429611 -0.012823634 -0.39520299 -0.010936615  0.18976934
#>  [5,] 0.3162278 -0.008987122 -0.324837128 -0.03576240 -0.520094314  0.09715171
#>  [6,] 0.3162278 -0.008987122  0.885317360 -0.03576240  0.011289512  0.08391308
#>  [7,] 0.3162278 -0.008987122 -0.265630853 -0.03576240  0.828741997  0.08475453
#>  [8,] 0.3162278  0.017241226 -0.024584464 -0.10975216 -0.028221552 -0.92731300
#>  [9,] 0.3162278  0.004127052  0.007598839 -0.07275728 -0.008192382  0.18843846
#> [10,] 0.3162278 -0.138332864 -0.190573627 -0.23329390 -0.195999857  0.20369300
#>              [,7]          [,8]        [,9]       [,10]
#>  [1,]  0.73328515  0.000000e+00  0.51671692  0.00000000
#>  [2,]  0.14335026 -1.362105e-01  0.10553452 -0.11444964
#>  [3,] -0.18784094 -7.668609e-02  0.20634899 -0.06443479
#>  [4,] -0.62059395  3.338728e-05  0.53863646 -0.13500552
#>  [5,]  0.01249688  6.745884e-01 -0.23166759  0.06549044
#>  [6,]  0.01249688  2.036826e-01 -0.23166759 -0.11122921
#>  [7,]  0.01249688  2.752796e-01 -0.23166759 -0.06692548
#>  [8,] -0.11782295 -7.953497e-02 -0.07310284  0.02819357
#>  [9,] -0.05266303 -3.163103e-01 -0.15238521  0.85615920
#> [10,]  0.06479481 -5.448421e-01 -0.44674607 -0.45779857
#> 
#> [[1]]$snpIdx
#>  [1]  1  2  3  4  5  6  7  8  9 10
#> 
#> 
#> [[2]]
#> [[2]]$values
#>  [1] 3.7 0.7 0.7 0.7 0.7 0.7 0.7 0.7 0.7 0.7
#> 
#> [[2]]$vectors
#>            [,1]         [,2]         [,3]        [,4]         [,5]        [,6]
#>  [1,] 0.3162278 -0.182582950  0.000000000 -0.24891760  0.000000000  0.00000000
#>  [2,] 0.3162278  0.779056986 -0.047643407  0.47166438 -0.048999964  0.05092325
#>  [3,] 0.3162278 -0.570977695 -0.026823087  0.69554676 -0.027586824  0.02866963
#>  [4,] 0.3162278  0.118429611 -0.012823634 -0.39520299 -0.010936615  0.18976934
#>  [5,] 0.3162278 -0.008987122 -0.324837128 -0.03576240 -0.520094314  0.09715171
#>  [6,] 0.3162278 -0.008987122  0.885317360 -0.03576240  0.011289512  0.08391308
#>  [7,] 0.3162278 -0.008987122 -0.265630853 -0.03576240  0.828741997  0.08475453
#>  [8,] 0.3162278  0.017241226 -0.024584464 -0.10975216 -0.028221552 -0.92731300
#>  [9,] 0.3162278  0.004127052  0.007598839 -0.07275728 -0.008192382  0.18843846
#> [10,] 0.3162278 -0.138332864 -0.190573627 -0.23329390 -0.195999857  0.20369300
#>              [,7]          [,8]        [,9]       [,10]
#>  [1,]  0.73328515  0.000000e+00  0.51671692  0.00000000
#>  [2,]  0.14335026 -1.362105e-01  0.10553452 -0.11444964
#>  [3,] -0.18784094 -7.668609e-02  0.20634899 -0.06443479
#>  [4,] -0.62059395  3.338728e-05  0.53863646 -0.13500552
#>  [5,]  0.01249688  6.745884e-01 -0.23166759  0.06549044
#>  [6,]  0.01249688  2.036826e-01 -0.23166759 -0.11122921
#>  [7,]  0.01249688  2.752796e-01 -0.23166759 -0.06692548
#>  [8,] -0.11782295 -7.953497e-02 -0.07310284  0.02819357
#>  [9,] -0.05266303 -3.163103e-01 -0.15238521  0.85615920
#> [10,]  0.06479481 -5.448421e-01 -0.44674607 -0.45779857
#> 
#> [[2]]$snpIdx
#>  [1] 11 12 13 14 15 16 17 18 19 20
#> 
#>