Get Block Metadata

Return the block metadata (GRanges or data.frame) carried by an LdData.

Usage

getBlockMetadata(x)

# S4 method for class 'LdData'
getBlockMetadata(x)

Arguments

x

An LdData.

Value

A GRanges or data.frame.

Examples

data(eqtlRegionExample)
X <- eqtlRegionExample$X[, 1:8]
gr <- GenomicRanges::GRanges("22",
  IRanges::IRanges(seq(1L, by = 100L, length.out = 8), width = 1L))
ld <- LdData(correlation = cor(X), variants = gr,
  blockMetadata = S4Vectors::DataFrame(
    chrom = "22", start = 1L, end = 1000L))
getBlockMetadata(ld)
#> DataFrame with 1 row and 3 columns
#>         chrom     start       end
#>   <character> <integer> <integer>
#> 1          22         1      1000