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Construct an AnnotationMatrix from a matrix and metadata.

Usage

AnnotationMatrix(annotations, snp_ranges, annotation_meta, genome = "hg19")

Arguments

annotations

A numeric matrix or sparse matrix (SNPs x annotations).

snp_ranges

A GRanges object with SNP positions.

annotation_meta

A data.frame with columns: name, tier, type.

genome

Character, genome build.

Value

An AnnotationMatrix object.