RNA Splicing Data#
Bulk and single-nucleus RNA splicing datasets used for sQTL mapping. Bulk data uses LeafCutter intron excision quantification; single-nucleus data uses the ISSAC method with junctools splice site usage. → See sQTL results
Brain Tissue — ROSMAP#
| Dataset | Region / Type |
|---|---|
| ROSMAP DLPFC | Dorsolateral prefrontal cortex (bulk) |
| ROSMAP PCC | Posterior cingulate cortex (bulk) |
| ROSMAP AC | Anterior cingulate cortex (bulk) |
| ROSMAP snuc (ISSAC) | Single-nucleus, 7 major + 95 subcell types |
Brain Tissue — Other Cohorts#
| Dataset | Cohort |
|---|---|
| MSBB | Mount Sinai Brain Bank (4 regions) |
| Knight ADRC | Knight ADRC brain (WashU) |
Blood#
| Dataset | Cohort |
|---|---|
| MAGENTA African American | Whole blood, African American |
| MAGENTA Non-Hispanic White | Whole blood, Non-Hispanic White |